Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh16O88338 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh16O88338 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh16O88338 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh16O88338 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh16O88338 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh16O88338 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdh16O88338 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh16O88338 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.16■□□□□ 0.66
Cdh16O88338 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh16O88338 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh16O88338 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh16O88338 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh16O88338 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cdh16O88338 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.16■□□□□ 0.66
Cdh16O88338 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh16O88338 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cdh16O88338 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh16O88338 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cdh16O88338 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.16■□□□□ 0.66
Cdh16O88338 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh16O88338 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cdh16O88338 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.15■□□□□ 0.66
Cdh16O88338 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh16O88338 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh16O88338 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cdh16O88338 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh16O88338 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Cdh16O88338 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh16O88338 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.15■□□□□ 0.66
Cdh16O88338 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh16O88338 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh16O88338 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh16O88338 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cdh16O88338 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh16O88338 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cdh16O88338 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.14■□□□□ 0.65
Cdh16O88338 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh16O88338 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh16O88338 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh16O88338 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Cdh16O88338 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh16O88338 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.14■□□□□ 0.65
Cdh16O88338 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Cdh16O88338 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh16O88338 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.14■□□□□ 0.65
Cdh16O88338 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh16O88338 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh16O88338 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cdh16O88338 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh16O88338 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh16O88338 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh16O88338 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.13■□□□□ 0.65
Cdh16O88338 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh16O88338 Gm5921-201ENSMUST00000075898 882 ntBASIC19.13■□□□□ 0.65
Cdh16O88338 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh16O88338 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh16O88338 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cdh16O88338 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh16O88338 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cdh16O88338 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Cdh16O88338 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Cdh16O88338 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh16O88338 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh16O88338 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.12■□□□□ 0.65
Cdh16O88338 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh16O88338 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh16O88338 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh16O88338 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh16O88338 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh16O88338 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cdh16O88338 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.12■□□□□ 0.65
Cdh16O88338 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cdh16O88338 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh16O88338 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cdh16O88338 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.11■□□□□ 0.65
Cdh16O88338 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cdh16O88338 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh16O88338 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh16O88338 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh16O88338 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh16O88338 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh16O88338 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh16O88338 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cdh16O88338 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh16O88338 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh16O88338 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh16O88338 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh16O88338 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.1■□□□□ 0.65
Cdh16O88338 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh16O88338 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh16O88338 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh16O88338 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cdh16O88338 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cdh16O88338 Gm13238-201ENSMUST00000117655 780 ntBASIC19.09■□□□□ 0.65
Cdh16O88338 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms