Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
PLOD3O60568 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.7■□□□□ 0.9
PLOD3O60568 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.7■□□□□ 0.9
PLOD3O60568 AL499627.2-201ENST00000606283 725 ntBASIC20.7■□□□□ 0.9
PLOD3O60568 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.7■□□□□ 0.9
PLOD3O60568 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PLOD3O60568 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PLOD3O60568 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.7■□□□□ 0.9
PLOD3O60568 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.7■□□□□ 0.9
PLOD3O60568 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PLOD3O60568 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PLOD3O60568 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PLOD3O60568 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 AC131281.2-201ENST00000520478 145 ntBASIC20.69■□□□□ 0.9
PLOD3O60568 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.69■□□□□ 0.9
PLOD3O60568 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 MIR4466-201ENST00000606121 54 ntBASIC20.69■□□□□ 0.9
PLOD3O60568 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
PLOD3O60568 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PLOD3O60568 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.69■□□□□ 0.9
PLOD3O60568 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PLOD3O60568 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.69■□□□□ 0.9
PLOD3O60568 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
PLOD3O60568 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PLOD3O60568 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.68■□□□□ 0.9
PLOD3O60568 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.68■□□□□ 0.9
PLOD3O60568 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.68■□□□□ 0.9
PLOD3O60568 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PLOD3O60568 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.68■□□□□ 0.9
PLOD3O60568 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.68■□□□□ 0.9
PLOD3O60568 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 AC099791.2-201ENST00000605725 427 ntBASIC20.68■□□□□ 0.9
PLOD3O60568 AC092171.4-201ENST00000609130 632 ntBASIC20.68■□□□□ 0.9
PLOD3O60568 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.68■□□□□ 0.9
PLOD3O60568 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PLOD3O60568 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PLOD3O60568 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
PLOD3O60568 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PLOD3O60568 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PLOD3O60568 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PLOD3O60568 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.67■□□□□ 0.9
PLOD3O60568 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.67■□□□□ 0.9
PLOD3O60568 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PLOD3O60568 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PLOD3O60568 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PLOD3O60568 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PLOD3O60568 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.67■□□□□ 0.9
PLOD3O60568 PKD1P6-201ENST00000343738 4769 ntBASIC20.67■□□□□ 0.9
PLOD3O60568 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PLOD3O60568 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
PLOD3O60568 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PLOD3O60568 C1orf229-201ENST00000623686 2258 ntBASIC20.66■□□□□ 0.9
PLOD3O60568 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PLOD3O60568 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.66■□□□□ 0.9
PLOD3O60568 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PLOD3O60568 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PLOD3O60568 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PLOD3O60568 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.66■□□□□ 0.9
PLOD3O60568 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.66■□□□□ 0.9
PLOD3O60568 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PLOD3O60568 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PLOD3O60568 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.65■□□□□ 0.9
PLOD3O60568 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PLOD3O60568 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.65■□□□□ 0.9
PLOD3O60568 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 AC006455.2-201ENST00000429931 906 ntBASIC20.65■□□□□ 0.9
PLOD3O60568 AC131212.1-201ENST00000613771 668 ntBASIC20.65■□□□□ 0.9
PLOD3O60568 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PLOD3O60568 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PLOD3O60568 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.65■□□□□ 0.9
PLOD3O60568 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PLOD3O60568 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
PLOD3O60568 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms