Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.8■□□□□ 0.6
Polr2jO08740 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2jO08740 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.8■□□□□ 0.6
Polr2jO08740 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Polr2jO08740 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2jO08740 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2jO08740 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2jO08740 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2jO08740 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Polr2jO08740 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Polr2jO08740 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr2jO08740 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Polr2jO08740 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.78■□□□□ 0.6
Polr2jO08740 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Polr2jO08740 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Polr2jO08740 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Polr2jO08740 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr2jO08740 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr2jO08740 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Polr2jO08740 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.77■□□□□ 0.6
Polr2jO08740 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.77■□□□□ 0.6
Polr2jO08740 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Polr2jO08740 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Polr2jO08740 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr2jO08740 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Polr2jO08740 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Polr2jO08740 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.76■□□□□ 0.59
Polr2jO08740 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.76■□□□□ 0.59
Polr2jO08740 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.76■□□□□ 0.59
Polr2jO08740 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
Polr2jO08740 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Polr2jO08740 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Polr2jO08740 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr2jO08740 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr2jO08740 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.75■□□□□ 0.59
Polr2jO08740 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr2jO08740 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.75■□□□□ 0.59
Polr2jO08740 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr2jO08740 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr2jO08740 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Polr2jO08740 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Polr2jO08740 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2jO08740 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Polr2jO08740 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2jO08740 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2jO08740 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.74■□□□□ 0.59
Polr2jO08740 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.74■□□□□ 0.59
Polr2jO08740 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2jO08740 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2jO08740 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2jO08740 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Polr2jO08740 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.73■□□□□ 0.59
Polr2jO08740 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Polr2jO08740 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.73■□□□□ 0.59
Polr2jO08740 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Polr2jO08740 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Polr2jO08740 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2jO08740 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2jO08740 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Polr2jO08740 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.72■□□□□ 0.59
Polr2jO08740 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.72■□□□□ 0.59
Polr2jO08740 Etf1-202ENSMUST00000180351 108 ntBASIC18.72■□□□□ 0.59
Polr2jO08740 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms