Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Gm9870-201ENSMUST00000063874 645 ntBASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
C530025M09RikF6RGA8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
C530025M09RikF6RGA8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
C530025M09RikF6RGA8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
C530025M09RikF6RGA8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
C530025M09RikF6RGA8 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C530025M09RikF6RGA8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C530025M09RikF6RGA8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C530025M09RikF6RGA8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms