Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raph1F2Z3U3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Raph1F2Z3U3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Raph1F2Z3U3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raph1F2Z3U3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raph1F2Z3U3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raph1F2Z3U3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raph1F2Z3U3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Raph1F2Z3U3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Raph1F2Z3U3 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.46■□□□□ 0.71
Raph1F2Z3U3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Raph1F2Z3U3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Raph1F2Z3U3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raph1F2Z3U3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raph1F2Z3U3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raph1F2Z3U3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raph1F2Z3U3 Gm5812-201ENSMUST00000061073 957 ntBASIC19.43■□□□□ 0.7
Raph1F2Z3U3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Raph1F2Z3U3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Raph1F2Z3U3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Raph1F2Z3U3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Raph1F2Z3U3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Raph1F2Z3U3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Raph1F2Z3U3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Raph1F2Z3U3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raph1F2Z3U3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raph1F2Z3U3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Raph1F2Z3U3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Raph1F2Z3U3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Raph1F2Z3U3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.39■□□□□ 0.7
Raph1F2Z3U3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Raph1F2Z3U3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Raph1F2Z3U3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raph1F2Z3U3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Raph1F2Z3U3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Raph1F2Z3U3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.38■□□□□ 0.69
Raph1F2Z3U3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.38■□□□□ 0.69
Raph1F2Z3U3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.38■□□□□ 0.69
Raph1F2Z3U3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Raph1F2Z3U3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms