Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim17A0A504 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.8■□□□□ 0.44
Smim17A0A504 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.8■□□□□ 0.44
Smim17A0A504 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim17A0A504 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim17A0A504 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim17A0A504 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smim17A0A504 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim17A0A504 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim17A0A504 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smim17A0A504 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smim17A0A504 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.79■□□□□ 0.44
Smim17A0A504 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.79■□□□□ 0.44
Smim17A0A504 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim17A0A504 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim17A0A504 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim17A0A504 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smim17A0A504 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim17A0A504 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smim17A0A504 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
Smim17A0A504 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim17A0A504 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smim17A0A504 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smim17A0A504 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.77■□□□□ 0.44
Smim17A0A504 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Smim17A0A504 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smim17A0A504 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smim17A0A504 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Smim17A0A504 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smim17A0A504 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Smim17A0A504 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.76■□□□□ 0.43
Smim17A0A504 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smim17A0A504 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.76■□□□□ 0.43
Smim17A0A504 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim17A0A504 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim17A0A504 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Smim17A0A504 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim17A0A504 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.76■□□□□ 0.43
Smim17A0A504 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smim17A0A504 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim17A0A504 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim17A0A504 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.75■□□□□ 0.43
Smim17A0A504 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.75■□□□□ 0.43
Smim17A0A504 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.75■□□□□ 0.43
Smim17A0A504 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim17A0A504 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.75■□□□□ 0.43
Smim17A0A504 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim17A0A504 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smim17A0A504 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.74■□□□□ 0.43
Smim17A0A504 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.74■□□□□ 0.43
Smim17A0A504 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.74■□□□□ 0.43
Smim17A0A504 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim17A0A504 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smim17A0A504 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smim17A0A504 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim17A0A504 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smim17A0A504 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim17A0A504 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.73■□□□□ 0.43
Smim17A0A504 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smim17A0A504 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim17A0A504 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smim17A0A504 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smim17A0A504 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smim17A0A504 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim17A0A504 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms