Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ighv1-47A0A0A6YY41 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ighv1-47A0A0A6YY41 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.17■□□□□ 0.18
Ighv1-47A0A0A6YY41 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ighv1-47A0A0A6YY41 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-47A0A0A6YY41 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.15■□□□□ 0.18
Ighv1-47A0A0A6YY41 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-47A0A0A6YY41 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-47A0A0A6YY41 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-47A0A0A6YY41 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Mir6236-201ENSMUST00000184437 123 ntBASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
Ighv1-47A0A0A6YY41 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-47A0A0A6YY41 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-47A0A0A6YY41 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-47A0A0A6YY41 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-47A0A0A6YY41 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
Ighv1-47A0A0A6YY41 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-47A0A0A6YY41 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-47A0A0A6YY41 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-47A0A0A6YY41 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-47A0A0A6YY41 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-47A0A0A6YY41 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-47A0A0A6YY41 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms