Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gm43566-201ENSMUST00000196851 808 ntBASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gm5784-201ENSMUST00000179344 2478 ntBASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Mir6236-201ENSMUST00000184437 123 ntBASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15-2-dv6-2A0A075B650 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms