Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col25a1Q99MQ5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col25a1Q99MQ5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.57■□□□□ 0.88
Col25a1Q99MQ5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Gm18101-201ENSMUST00000215769 548 ntBASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col25a1Q99MQ5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col25a1Q99MQ5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col25a1Q99MQ5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.55■□□□□ 0.88
Col25a1Q99MQ5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.55■□□□□ 0.88
Col25a1Q99MQ5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col25a1Q99MQ5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.55■□□□□ 0.88
Col25a1Q99MQ5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col25a1Q99MQ5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.55■□□□□ 0.88
Col25a1Q99MQ5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col25a1Q99MQ5 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Gm715-201ENSMUST00000117865 831 ntBASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col25a1Q99MQ5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Gm25925-201ENSMUST00000158314 306 ntBASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col25a1Q99MQ5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.52■□□□□ 0.88
Col25a1Q99MQ5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col25a1Q99MQ5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.52■□□□□ 0.88
Col25a1Q99MQ5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col25a1Q99MQ5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col25a1Q99MQ5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col25a1Q99MQ5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.52■□□□□ 0.87
Col25a1Q99MQ5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Col25a1Q99MQ5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col25a1Q99MQ5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.51■□□□□ 0.87
Col25a1Q99MQ5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.51■□□□□ 0.87
Col25a1Q99MQ5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col25a1Q99MQ5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col25a1Q99MQ5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col25a1Q99MQ5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.51■□□□□ 0.87
Col25a1Q99MQ5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col25a1Q99MQ5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Gm43530-201ENSMUST00000195920 274 ntBASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.5■□□□□ 0.87
Col25a1Q99MQ5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col25a1Q99MQ5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Col25a1Q99MQ5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col25a1Q99MQ5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col25a1Q99MQ5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col25a1Q99MQ5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col25a1Q99MQ5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col25a1Q99MQ5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.49■□□□□ 0.87
Col25a1Q99MQ5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col25a1Q99MQ5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 Gm9987-201ENSMUST00000069768 567 ntBASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col25a1Q99MQ5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col25a1Q99MQ5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms