Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPENQ96T58 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
SPENQ96T58 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPENQ96T58 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPENQ96T58 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPENQ96T58 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPENQ96T58 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPENQ96T58 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPENQ96T58 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPENQ96T58 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SPENQ96T58 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.21■□□□□ 0.83
SPENQ96T58 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SPENQ96T58 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPENQ96T58 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.21■□□□□ 0.83
SPENQ96T58 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPENQ96T58 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPENQ96T58 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPENQ96T58 NCF1B-203ENST00000435988 1254 ntBASIC20.21■□□□□ 0.83
SPENQ96T58 MIR4651-201ENST00000582622 73 ntBASIC20.21■□□□□ 0.83
SPENQ96T58 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.21■□□□□ 0.83
SPENQ96T58 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
SPENQ96T58 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SPENQ96T58 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.2■□□□□ 0.82
SPENQ96T58 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.2■□□□□ 0.82
SPENQ96T58 AL050303.2-201ENST00000619798 666 ntBASIC20.2■□□□□ 0.82
SPENQ96T58 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.2■□□□□ 0.82
SPENQ96T58 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPENQ96T58 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPENQ96T58 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.2■□□□□ 0.82
SPENQ96T58 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.2■□□□□ 0.82
SPENQ96T58 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SPENQ96T58 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPENQ96T58 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPENQ96T58 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.19■□□□□ 0.82
SPENQ96T58 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.19■□□□□ 0.82
SPENQ96T58 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.19■□□□□ 0.82
SPENQ96T58 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPENQ96T58 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.19■□□□□ 0.82
SPENQ96T58 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPENQ96T58 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.19■□□□□ 0.82
SPENQ96T58 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPENQ96T58 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPENQ96T58 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPENQ96T58 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SPENQ96T58 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SPENQ96T58 OR2I1P-207ENST00000453522 948 ntBASIC20.18■□□□□ 0.82
SPENQ96T58 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SPENQ96T58 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPENQ96T58 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPENQ96T58 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.18■□□□□ 0.82
SPENQ96T58 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPENQ96T58 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPENQ96T58 AC010525.1-201ENST00000585559 441 ntBASIC20.18■□□□□ 0.82
SPENQ96T58 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SPENQ96T58 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPENQ96T58 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPENQ96T58 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.17■□□□□ 0.82
SPENQ96T58 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SPENQ96T58 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.17■□□□□ 0.82
SPENQ96T58 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SPENQ96T58 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SPENQ96T58 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.17■□□□□ 0.82
SPENQ96T58 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.17■□□□□ 0.82
SPENQ96T58 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPENQ96T58 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPENQ96T58 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPENQ96T58 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SPENQ96T58 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPENQ96T58 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPENQ96T58 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.17■□□□□ 0.82
SPENQ96T58 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPENQ96T58 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPENQ96T58 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.17■□□□□ 0.82
SPENQ96T58 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.16■□□□□ 0.82
SPENQ96T58 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPENQ96T58 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.16■□□□□ 0.82
SPENQ96T58 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.16■□□□□ 0.82
SPENQ96T58 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPENQ96T58 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.16■□□□□ 0.82
SPENQ96T58 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.16■□□□□ 0.82
SPENQ96T58 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPENQ96T58 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPENQ96T58 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPENQ96T58 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SPENQ96T58 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SPENQ96T58 AC016769.1-201ENST00000409132 1010 ntBASIC20.16■□□□□ 0.82
SPENQ96T58 AC098934.4-201ENST00000564127 592 ntBASIC20.16■□□□□ 0.82
SPENQ96T58 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SPENQ96T58 AC004812.2-201ENST00000611079 2094 ntBASIC20.16■□□□□ 0.82
SPENQ96T58 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPENQ96T58 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPENQ96T58 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.15■□□□□ 0.82
SPENQ96T58 AL109923.1-201ENST00000618799 583 ntBASIC20.15■□□□□ 0.82
SPENQ96T58 AC145676.1-201ENST00000514988 2004 ntBASIC20.15■□□□□ 0.82
SPENQ96T58 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPENQ96T58 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPENQ96T58 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPENQ96T58 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPENQ96T58 TSPY20P-201ENST00000450910 630 ntBASIC20.15■□□□□ 0.82
SPENQ96T58 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms