Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chmp1aQ921W0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chmp1aQ921W0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chmp1aQ921W0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Gm12366-201ENSMUST00000121722 873 ntBASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Gm5786-201ENSMUST00000085368 882 ntBASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Chmp1aQ921W0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp1aQ921W0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Chmp1aQ921W0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp1aQ921W0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp1aQ921W0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp1aQ921W0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp1aQ921W0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Chmp1aQ921W0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp1aQ921W0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp1aQ921W0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp1aQ921W0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp1aQ921W0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp1aQ921W0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chmp1aQ921W0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp1aQ921W0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp1aQ921W0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chmp1aQ921W0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms