Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rp1l1Q8CGM2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.93■□□□□ 0.94
Rp1l1Q8CGM2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rp1l1Q8CGM2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rp1l1Q8CGM2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.93■□□□□ 0.94
Rp1l1Q8CGM2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rp1l1Q8CGM2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rp1l1Q8CGM2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Rp1l1Q8CGM2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rp1l1Q8CGM2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rp1l1Q8CGM2 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.91■□□□□ 0.94
Rp1l1Q8CGM2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rp1l1Q8CGM2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rp1l1Q8CGM2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rp1l1Q8CGM2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rp1l1Q8CGM2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Rp1l1Q8CGM2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rp1l1Q8CGM2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rp1l1Q8CGM2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Gm13534-201ENSMUST00000121169 513 ntBASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rp1l1Q8CGM2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rp1l1Q8CGM2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rp1l1Q8CGM2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rp1l1Q8CGM2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rp1l1Q8CGM2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rp1l1Q8CGM2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rp1l1Q8CGM2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rp1l1Q8CGM2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rp1l1Q8CGM2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Rp1l1Q8CGM2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rp1l1Q8CGM2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rp1l1Q8CGM2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.86■□□□□ 0.93
Rp1l1Q8CGM2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rp1l1Q8CGM2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rp1l1Q8CGM2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.85■□□□□ 0.93
Rp1l1Q8CGM2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rp1l1Q8CGM2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
Rp1l1Q8CGM2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rp1l1Q8CGM2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rp1l1Q8CGM2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rp1l1Q8CGM2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.85■□□□□ 0.93
Rp1l1Q8CGM2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rp1l1Q8CGM2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rp1l1Q8CGM2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 Mir6982-201ENSMUST00000184354 68 ntBASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 Gm7977-201ENSMUST00000193787 748 ntBASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rp1l1Q8CGM2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Rp1l1Q8CGM2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.83■□□□□ 0.92
Rp1l1Q8CGM2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rp1l1Q8CGM2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rp1l1Q8CGM2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.83■□□□□ 0.92
Rp1l1Q8CGM2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rp1l1Q8CGM2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rp1l1Q8CGM2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rp1l1Q8CGM2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rp1l1Q8CGM2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rp1l1Q8CGM2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rp1l1Q8CGM2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rp1l1Q8CGM2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rp1l1Q8CGM2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms