Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Upk3bQ80YF6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Upk3bQ80YF6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Mir6236-201ENSMUST00000184437 123 ntBASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Upk3bQ80YF6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Gm13238-201ENSMUST00000117655 780 ntBASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Gm10232-201ENSMUST00000089221 720 ntBASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Upk3bQ80YF6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Upk3bQ80YF6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3bQ80YF6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.63■□□□□ 0.25
Upk3bQ80YF6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3bQ80YF6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3bQ80YF6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3bQ80YF6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3bQ80YF6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Upk3bQ80YF6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Upk3bQ80YF6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Upk3bQ80YF6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Gm5921-201ENSMUST00000075898 882 ntBASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Upk3bQ80YF6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.6■□□□□ 0.25
Upk3bQ80YF6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.59■□□□□ 0.25
Upk3bQ80YF6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Upk3bQ80YF6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms