Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scn10aQ6QIY3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scn10aQ6QIY3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scn10aQ6QIY3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Scn10aQ6QIY3 Gm8520-201ENSMUST00000186517 868 ntBASIC22.85■■□□□ 1.25
Scn10aQ6QIY3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC22.85■■□□□ 1.25
Scn10aQ6QIY3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Scn10aQ6QIY3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Scn10aQ6QIY3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Scn10aQ6QIY3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.84■■□□□ 1.25
Scn10aQ6QIY3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Scn10aQ6QIY3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Scn10aQ6QIY3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Scn10aQ6QIY3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Scn10aQ6QIY3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Scn10aQ6QIY3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
Scn10aQ6QIY3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Scn10aQ6QIY3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Scn10aQ6QIY3 Gm6420-201ENSMUST00000193885 723 ntBASIC22.83■■□□□ 1.24
Scn10aQ6QIY3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Scn10aQ6QIY3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Scn10aQ6QIY3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scn10aQ6QIY3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scn10aQ6QIY3 Gm13168-201ENSMUST00000121771 632 ntBASIC22.82■■□□□ 1.24
Scn10aQ6QIY3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.82■■□□□ 1.24
Scn10aQ6QIY3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scn10aQ6QIY3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Scn10aQ6QIY3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scn10aQ6QIY3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scn10aQ6QIY3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.81■■□□□ 1.24
Scn10aQ6QIY3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.81■■□□□ 1.24
Scn10aQ6QIY3 Gm37856-201ENSMUST00000191634 999 ntBASIC22.81■■□□□ 1.24
Scn10aQ6QIY3 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.81■■□□□ 1.24
Scn10aQ6QIY3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scn10aQ6QIY3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.81■■□□□ 1.24
Scn10aQ6QIY3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Scn10aQ6QIY3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Scn10aQ6QIY3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Scn10aQ6QIY3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
Scn10aQ6QIY3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Scn10aQ6QIY3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Scn10aQ6QIY3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.79■■□□□ 1.24
Scn10aQ6QIY3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Scn10aQ6QIY3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 AC135637.1-201ENSMUST00000227750 365 ntBASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Gm6365-201ENSMUST00000054711 744 ntBASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Scn10aQ6QIY3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Scn10aQ6QIY3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.76■■□□□ 1.23
Scn10aQ6QIY3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Scn10aQ6QIY3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Scn10aQ6QIY3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Scn10aQ6QIY3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Scn10aQ6QIY3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.76■■□□□ 1.23
Scn10aQ6QIY3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Scn10aQ6QIY3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC22.75■■□□□ 1.23
Scn10aQ6QIY3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Scn10aQ6QIY3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Scn10aQ6QIY3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.75■■□□□ 1.23
Scn10aQ6QIY3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Scn10aQ6QIY3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scn10aQ6QIY3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms