Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Krt39Q6IFX4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.81■■□□□ 1.08
Krt39Q6IFX4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
Krt39Q6IFX4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt39Q6IFX4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Krt39Q6IFX4 Gm9959-201ENSMUST00000068277 390 ntBASIC21.81■■□□□ 1.08
Krt39Q6IFX4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Krt39Q6IFX4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt39Q6IFX4 Etf1-202ENSMUST00000180351 108 ntBASIC21.8■■□□□ 1.08
Krt39Q6IFX4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Krt39Q6IFX4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt39Q6IFX4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Krt39Q6IFX4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt39Q6IFX4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt39Q6IFX4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Krt39Q6IFX4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt39Q6IFX4 Mir6236-201ENSMUST00000184437 123 ntBASIC21.79■■□□□ 1.08
Krt39Q6IFX4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.79■■□□□ 1.08
Krt39Q6IFX4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt39Q6IFX4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Krt39Q6IFX4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt39Q6IFX4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt39Q6IFX4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt39Q6IFX4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.77■■□□□ 1.08
Krt39Q6IFX4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Krt39Q6IFX4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt39Q6IFX4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Krt39Q6IFX4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt39Q6IFX4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt39Q6IFX4 Gm45102-201ENSMUST00000207427 857 ntBASIC21.77■■□□□ 1.08
Krt39Q6IFX4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.77■■□□□ 1.08
Krt39Q6IFX4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.77■■□□□ 1.08
Krt39Q6IFX4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.77■■□□□ 1.08
Krt39Q6IFX4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Krt39Q6IFX4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Krt39Q6IFX4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Krt39Q6IFX4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.07
Krt39Q6IFX4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Krt39Q6IFX4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Krt39Q6IFX4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Gm14117-201ENSMUST00000122417 843 ntBASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Gm43530-201ENSMUST00000195920 274 ntBASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt39Q6IFX4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Krt39Q6IFX4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt39Q6IFX4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt39Q6IFX4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Krt39Q6IFX4 Gm9870-201ENSMUST00000063874 645 ntBASIC21.74■■□□□ 1.07
Krt39Q6IFX4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt39Q6IFX4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt39Q6IFX4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt39Q6IFX4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Krt39Q6IFX4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Krt39Q6IFX4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt39Q6IFX4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt39Q6IFX4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Krt39Q6IFX4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Krt39Q6IFX4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Krt39Q6IFX4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Krt39Q6IFX4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Krt39Q6IFX4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.72■■□□□ 1.07
Krt39Q6IFX4 Gm7417-201ENSMUST00000192950 473 ntBASIC21.72■■□□□ 1.07
Krt39Q6IFX4 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.72■■□□□ 1.07
Krt39Q6IFX4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Krt39Q6IFX4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Krt39Q6IFX4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt39Q6IFX4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt39Q6IFX4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt39Q6IFX4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Krt39Q6IFX4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Krt39Q6IFX4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Krt39Q6IFX4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms