Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox16Q62247 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox16Q62247 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox16Q62247 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Sox16Q62247 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox16Q62247 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sox16Q62247 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sox16Q62247 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Hsf1-204ENSMUST00000226872 2104 ntBASIC11.3□□□□□ -0.6
Sox16Q62247 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox16Q62247 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox16Q62247 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Sox16Q62247 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox16Q62247 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sox16Q62247 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox16Q62247 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 Gm35558-201ENSMUST00000222675 2219 ntBASIC11.28□□□□□ -0.6
Sox16Q62247 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.28□□□□□ -0.6
Sox16Q62247 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox16Q62247 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Sox16Q62247 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Sox16Q62247 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox16Q62247 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Sox16Q62247 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox16Q62247 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox16Q62247 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox16Q62247 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sox16Q62247 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox16Q62247 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox16Q62247 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox16Q62247 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Sox16Q62247 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Sox16Q62247 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox16Q62247 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox16Q62247 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox16Q62247 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sox16Q62247 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.26□□□□□ -0.61
Sox16Q62247 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox16Q62247 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox16Q62247 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sox16Q62247 Gm15045-201ENSMUST00000117359 883 ntBASIC11.26□□□□□ -0.61
Sox16Q62247 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox16Q62247 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sox16Q62247 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox16Q62247 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox16Q62247 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox16Q62247 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox16Q62247 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.25□□□□□ -0.61
Sox16Q62247 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Sox16Q62247 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox16Q62247 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Sox16Q62247 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox16Q62247 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox16Q62247 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox16Q62247 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox16Q62247 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox16Q62247 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox16Q62247 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox16Q62247 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox16Q62247 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox16Q62247 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox16Q62247 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox16Q62247 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox16Q62247 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox16Q62247 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox16Q62247 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox16Q62247 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Sox16Q62247 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox16Q62247 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Sox16Q62247 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox16Q62247 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox16Q62247 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms