Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shisa3Q3UPR0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa3Q3UPR0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa3Q3UPR0 Fam105a-203ENSMUST00000226170 3043 ntBASIC17■□□□□ 0.31
Shisa3Q3UPR0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Shisa3Q3UPR0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Shisa3Q3UPR0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17■□□□□ 0.31
Shisa3Q3UPR0 AC093043.1-201ENSMUST00000226700 898 ntBASIC17■□□□□ 0.31
Shisa3Q3UPR0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shisa3Q3UPR0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shisa3Q3UPR0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shisa3Q3UPR0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Shisa3Q3UPR0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Shisa3Q3UPR0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Shisa3Q3UPR0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Shisa3Q3UPR0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Shisa3Q3UPR0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Shisa3Q3UPR0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms