Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Surf6P70279 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Surf6P70279 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Surf6P70279 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Surf6P70279 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Surf6P70279 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Surf6P70279 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Surf6P70279 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Surf6P70279 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Surf6P70279 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Surf6P70279 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Surf6P70279 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Surf6P70279 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Surf6P70279 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.39■□□□□ 0.85
Surf6P70279 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Surf6P70279 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Surf6P70279 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Surf6P70279 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Surf6P70279 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Surf6P70279 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.38■□□□□ 0.85
Surf6P70279 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Surf6P70279 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Surf6P70279 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf6P70279 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf6P70279 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.37■□□□□ 0.85
Surf6P70279 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Surf6P70279 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf6P70279 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Surf6P70279 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Surf6P70279 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Surf6P70279 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf6P70279 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf6P70279 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Surf6P70279 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Surf6P70279 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf6P70279 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf6P70279 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf6P70279 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.36■□□□□ 0.85
Surf6P70279 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.36■□□□□ 0.85
Surf6P70279 Rarb-207ENSMUST00000225921 2756 ntBASIC20.36■□□□□ 0.85
Surf6P70279 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.36■□□□□ 0.85
Surf6P70279 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Surf6P70279 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.36■□□□□ 0.85
Surf6P70279 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Surf6P70279 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Surf6P70279 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf6P70279 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf6P70279 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.35■□□□□ 0.85
Surf6P70279 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf6P70279 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Surf6P70279 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Surf6P70279 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf6P70279 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf6P70279 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Surf6P70279 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf6P70279 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Surf6P70279 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Surf6P70279 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf6P70279 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf6P70279 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Surf6P70279 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.34■□□□□ 0.85
Surf6P70279 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.34■□□□□ 0.85
Surf6P70279 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf6P70279 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf6P70279 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf6P70279 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf6P70279 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Surf6P70279 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Surf6P70279 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Surf6P70279 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Surf6P70279 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Surf6P70279 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Surf6P70279 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Surf6P70279 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.33■□□□□ 0.85
Surf6P70279 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Surf6P70279 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Surf6P70279 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Surf6P70279 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Surf6P70279 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Surf6P70279 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.32■□□□□ 0.84
Surf6P70279 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Surf6P70279 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Surf6P70279 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Surf6P70279 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Surf6P70279 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Surf6P70279 Gm5921-201ENSMUST00000075898 882 ntBASIC20.32■□□□□ 0.84
Surf6P70279 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Surf6P70279 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Surf6P70279 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Surf6P70279 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Surf6P70279 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Surf6P70279 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Surf6P70279 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Surf6P70279 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Surf6P70279 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Surf6P70279 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Surf6P70279 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.31■□□□□ 0.84
Surf6P70279 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Surf6P70279 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Surf6P70279 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms