Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn2bP55271 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn2bP55271 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cdkn2bP55271 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.92■□□□□ 0.62
Cdkn2bP55271 Gm9870-201ENSMUST00000063874 645 ntBASIC18.92■□□□□ 0.62
Cdkn2bP55271 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cdkn2bP55271 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cdkn2bP55271 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn2bP55271 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn2bP55271 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn2bP55271 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn2bP55271 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn2bP55271 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cdkn2bP55271 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cdkn2bP55271 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cdkn2bP55271 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.91■□□□□ 0.62
Cdkn2bP55271 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkn2bP55271 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.91■□□□□ 0.62
Cdkn2bP55271 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkn2bP55271 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cdkn2bP55271 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkn2bP55271 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn2bP55271 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.9■□□□□ 0.62
Cdkn2bP55271 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.9■□□□□ 0.62
Cdkn2bP55271 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn2bP55271 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn2bP55271 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn2bP55271 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn2bP55271 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn2bP55271 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn2bP55271 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cdkn2bP55271 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdkn2bP55271 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdkn2bP55271 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdkn2bP55271 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdkn2bP55271 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkn2bP55271 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.89■□□□□ 0.61
Cdkn2bP55271 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkn2bP55271 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cdkn2bP55271 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdkn2bP55271 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkn2bP55271 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkn2bP55271 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkn2bP55271 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cdkn2bP55271 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdkn2bP55271 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkn2bP55271 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkn2bP55271 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Cdkn2bP55271 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkn2bP55271 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdkn2bP55271 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkn2bP55271 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.87■□□□□ 0.61
Cdkn2bP55271 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.87■□□□□ 0.61
Cdkn2bP55271 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn2bP55271 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn2bP55271 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.85■□□□□ 0.61
Cdkn2bP55271 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn2bP55271 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.84■□□□□ 0.61
Cdkn2bP55271 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn2bP55271 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms