Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Abca1P41233 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Abca1P41233 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca1P41233 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Abca1P41233 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Abca1P41233 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca1P41233 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Abca1P41233 Gm10602-201ENSMUST00000098239 609 ntBASIC16.28■□□□□ 0.2
Abca1P41233 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abca1P41233 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Abca1P41233 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Abca1P41233 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Abca1P41233 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abca1P41233 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Abca1P41233 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Abca1P41233 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abca1P41233 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abca1P41233 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Abca1P41233 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abca1P41233 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abca1P41233 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Abca1P41233 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abca1P41233 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Abca1P41233 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.26■□□□□ 0.19
Abca1P41233 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abca1P41233 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Abca1P41233 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca1P41233 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca1P41233 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.25■□□□□ 0.19
Abca1P41233 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.25■□□□□ 0.19
Abca1P41233 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca1P41233 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca1P41233 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca1P41233 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Abca1P41233 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Abca1P41233 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.25■□□□□ 0.19
Abca1P41233 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Abca1P41233 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.24■□□□□ 0.19
Abca1P41233 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Abca1P41233 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.24■□□□□ 0.19
Abca1P41233 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.24■□□□□ 0.19
Abca1P41233 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.24■□□□□ 0.19
Abca1P41233 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Abca1P41233 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Abca1P41233 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Abca1P41233 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.23■□□□□ 0.19
Abca1P41233 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Abca1P41233 Nespas-201ENSMUST00000143738 1083 ntBASIC16.23■□□□□ 0.19
Abca1P41233 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.23■□□□□ 0.19
Abca1P41233 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.23■□□□□ 0.19
Abca1P41233 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.23■□□□□ 0.19
Abca1P41233 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca1P41233 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.22■□□□□ 0.19
Abca1P41233 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.22■□□□□ 0.19
Abca1P41233 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Abca1P41233 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.22■□□□□ 0.19
Abca1P41233 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca1P41233 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Abca1P41233 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.21■□□□□ 0.19
Abca1P41233 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.21■□□□□ 0.19
Abca1P41233 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.21■□□□□ 0.19
Abca1P41233 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca1P41233 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.21■□□□□ 0.19
Abca1P41233 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms