Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a4A2AX52 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a4A2AX52 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.65■□□□□ 0.26
Col6a4A2AX52 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a4A2AX52 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a4A2AX52 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.65■□□□□ 0.26
Col6a4A2AX52 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a4A2AX52 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a4A2AX52 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a4A2AX52 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Col6a4A2AX52 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Col6a4A2AX52 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a4A2AX52 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col6a4A2AX52 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a4A2AX52 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.63■□□□□ 0.25
Col6a4A2AX52 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.63■□□□□ 0.25
Col6a4A2AX52 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a4A2AX52 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a4A2AX52 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col6a4A2AX52 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a4A2AX52 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.63■□□□□ 0.25
Col6a4A2AX52 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a4A2AX52 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.63■□□□□ 0.25
Col6a4A2AX52 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col6a4A2AX52 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a4A2AX52 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a4A2AX52 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a4A2AX52 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.63■□□□□ 0.25
Col6a4A2AX52 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a4A2AX52 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.62■□□□□ 0.25
Col6a4A2AX52 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a4A2AX52 Gm37856-201ENSMUST00000191634 999 ntBASIC16.62■□□□□ 0.25
Col6a4A2AX52 Gm20049-201ENSMUST00000219950 730 ntBASIC16.62■□□□□ 0.25
Col6a4A2AX52 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a4A2AX52 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a4A2AX52 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a4A2AX52 Gm7290-201ENSMUST00000104990 617 ntBASIC16.61■□□□□ 0.25
Col6a4A2AX52 Gm12918-201ENSMUST00000120234 636 ntBASIC16.61■□□□□ 0.25
Col6a4A2AX52 Gm15710-201ENSMUST00000121821 636 ntBASIC16.61■□□□□ 0.25
Col6a4A2AX52 Gm5075-201ENSMUST00000196916 622 ntBASIC16.61■□□□□ 0.25
Col6a4A2AX52 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Col6a4A2AX52 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.61■□□□□ 0.25
Col6a4A2AX52 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.61■□□□□ 0.25
Col6a4A2AX52 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a4A2AX52 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a4A2AX52 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a4A2AX52 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col6a4A2AX52 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a4A2AX52 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col6a4A2AX52 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.6■□□□□ 0.25
Col6a4A2AX52 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.6■□□□□ 0.25
Col6a4A2AX52 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.6■□□□□ 0.25
Col6a4A2AX52 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col6a4A2AX52 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a4A2AX52 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a4A2AX52 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a4A2AX52 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a4A2AX52 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a4A2AX52 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a4A2AX52 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.59■□□□□ 0.25
Col6a4A2AX52 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a4A2AX52 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col6a4A2AX52 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col6a4A2AX52 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col6a4A2AX52 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col6a4A2AX52 Gm13168-201ENSMUST00000121771 632 ntBASIC16.58■□□□□ 0.25
Col6a4A2AX52 Gm8520-201ENSMUST00000186517 868 ntBASIC16.58■□□□□ 0.25
Col6a4A2AX52 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.58■□□□□ 0.25
Col6a4A2AX52 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.58■□□□□ 0.25
Col6a4A2AX52 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.58■□□□□ 0.24
Col6a4A2AX52 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a4A2AX52 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a4A2AX52 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a4A2AX52 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Col6a4A2AX52 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a4A2AX52 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a4A2AX52 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms