Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ubr4A2AN08 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC10.67□□□□□ -0.7
Ubr4A2AN08 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
Ubr4A2AN08 AC137127.1-201ENSMUST00000213466 1078 ntBASIC10.66□□□□□ -0.7
Ubr4A2AN08 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC10.66□□□□□ -0.7
Ubr4A2AN08 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Gm6206-201ENSMUST00000133472 2199 ntBASIC10.66□□□□□ -0.7
Ubr4A2AN08 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ubr4A2AN08 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ubr4A2AN08 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Ubr4A2AN08 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ubr4A2AN08 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.65□□□□□ -0.71
Ubr4A2AN08 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.65□□□□□ -0.71
Ubr4A2AN08 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ubr4A2AN08 Ank2-226ENSMUST00000189368 339 ntBASIC10.64□□□□□ -0.71
Ubr4A2AN08 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.64□□□□□ -0.71
Ubr4A2AN08 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Ubr4A2AN08 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.64□□□□□ -0.71
Ubr4A2AN08 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.64□□□□□ -0.71
Ubr4A2AN08 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr4A2AN08 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.63□□□□□ -0.71
Ubr4A2AN08 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Gm5417-201ENSMUST00000079706 384 ntBASIC10.63□□□□□ -0.71
Ubr4A2AN08 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Gm6934-201ENSMUST00000194780 1905 ntBASIC10.63□□□□□ -0.71
Ubr4A2AN08 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Gm33142-201ENSMUST00000193913 867 ntBASIC10.63□□□□□ -0.71
Ubr4A2AN08 Gm43183-201ENSMUST00000200632 547 ntBASIC10.63□□□□□ -0.71
Ubr4A2AN08 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC10.63□□□□□ -0.71
Ubr4A2AN08 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Dio3-201ENSMUST00000097228 1449 ntBASIC10.62□□□□□ -0.71
Ubr4A2AN08 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr4A2AN08 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.61□□□□□ -0.71
Ubr4A2AN08 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms