Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm5580A0A0N4SVP8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Gm5580A0A0N4SVP8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gm5580A0A0N4SVP8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Gm5580A0A0N4SVP8 Gm43530-201ENSMUST00000195920 274 ntBASIC21.49■■□□□ 1.03
Gm5580A0A0N4SVP8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm5580A0A0N4SVP8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm5580A0A0N4SVP8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
Gm5580A0A0N4SVP8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Gm15820-201ENSMUST00000201566 728 ntBASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Gm9870-201ENSMUST00000063874 645 ntBASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm5580A0A0N4SVP8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.47■■□□□ 1.03
Gm5580A0A0N4SVP8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm5580A0A0N4SVP8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Gm5580A0A0N4SVP8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm5580A0A0N4SVP8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Gm5580A0A0N4SVP8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.47■■□□□ 1.03
Gm5580A0A0N4SVP8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Gm5580A0A0N4SVP8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.46■■□□□ 1.03
Gm5580A0A0N4SVP8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5580A0A0N4SVP8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5580A0A0N4SVP8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5580A0A0N4SVP8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.46■■□□□ 1.03
Gm5580A0A0N4SVP8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5580A0A0N4SVP8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.46■■□□□ 1.03
Gm5580A0A0N4SVP8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5580A0A0N4SVP8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Gm5580A0A0N4SVP8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Gm5580A0A0N4SVP8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Gm5580A0A0N4SVP8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gm5580A0A0N4SVP8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm5580A0A0N4SVP8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm5580A0A0N4SVP8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
Gm5580A0A0N4SVP8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Gm5580A0A0N4SVP8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.42■■□□□ 1.02
Gm5580A0A0N4SVP8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Gm5580A0A0N4SVP8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm5580A0A0N4SVP8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5580A0A0N4SVP8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5580A0A0N4SVP8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5580A0A0N4SVP8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.41■■□□□ 1.02
Gm5580A0A0N4SVP8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5580A0A0N4SVP8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5580A0A0N4SVP8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm5580A0A0N4SVP8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm5580A0A0N4SVP8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
Gm5580A0A0N4SVP8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm5580A0A0N4SVP8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gm5580A0A0N4SVP8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm5580A0A0N4SVP8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms