Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdv2-1A0A0G2JGB9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdv2-1A0A0G2JGB9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.46□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.46□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trdv2-1A0A0G2JGB9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Gm6311-201ENSMUST00000073790 878 ntBASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.42□□□□□ -0.1
Trdv2-1A0A0G2JGB9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms