Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav16A0A075B653 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Trav16A0A075B653 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Golph3-205ENSMUST00000228671 2842 ntBASIC15.17■□□□□ 0.02
Trav16A0A075B653 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav16A0A075B653 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav16A0A075B653 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.15■□□□□ 0.02
Trav16A0A075B653 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Gm10420-201ENSMUST00000121713 882 ntBASIC15.15■□□□□ 0.02
Trav16A0A075B653 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav16A0A075B653 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav16A0A075B653 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav16A0A075B653 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms