Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav16d-dv11A0A075B617 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Gm16437-201ENSMUST00000025669 507 ntBASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav16d-dv11A0A075B617 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav16d-dv11A0A075B617 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Trav16d-dv11A0A075B617 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.46□□□□□ -0.1
Trav16d-dv11A0A075B617 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Scarna2-201ENSMUST00000157560 414 ntBASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Golph3-205ENSMUST00000228671 2842 ntBASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav16d-dv11A0A075B617 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav16d-dv11A0A075B617 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav16d-dv11A0A075B617 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav16d-dv11A0A075B617 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16d-dv11A0A075B617 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16d-dv11A0A075B617 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.41□□□□□ -0.1
Trav16d-dv11A0A075B617 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav16d-dv11A0A075B617 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16d-dv11A0A075B617 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16d-dv11A0A075B617 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav16d-dv11A0A075B617 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms