Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4n-4A0A075B615 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav4n-4A0A075B615 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav4n-4A0A075B615 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav4n-4A0A075B615 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav4n-4A0A075B615 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4n-4A0A075B615 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4n-4A0A075B615 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4n-4A0A075B615 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav4n-4A0A075B615 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4n-4A0A075B615 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4n-4A0A075B615 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4n-4A0A075B615 Gm45364-201ENSMUST00000210883 159 ntBASIC13.7□□□□□ -0.22
Trav4n-4A0A075B615 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.7□□□□□ -0.22
Trav4n-4A0A075B615 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4n-4A0A075B615 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4n-4A0A075B615 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav4n-4A0A075B615 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav4n-4A0A075B615 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav4n-4A0A075B615 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav4n-4A0A075B615 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav4n-4A0A075B615 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav4n-4A0A075B615 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms