Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lime1Q9EQR5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lime1Q9EQR5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Lime1Q9EQR5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lime1Q9EQR5 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.31■□□□□ 0.36
Lime1Q9EQR5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.31■□□□□ 0.36
Lime1Q9EQR5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.31■□□□□ 0.36
Lime1Q9EQR5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lime1Q9EQR5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.31■□□□□ 0.36
Lime1Q9EQR5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lime1Q9EQR5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Lime1Q9EQR5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.3■□□□□ 0.36
Lime1Q9EQR5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lime1Q9EQR5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lime1Q9EQR5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lime1Q9EQR5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Lime1Q9EQR5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lime1Q9EQR5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lime1Q9EQR5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.29■□□□□ 0.36
Lime1Q9EQR5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.28■□□□□ 0.36
Lime1Q9EQR5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lime1Q9EQR5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lime1Q9EQR5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lime1Q9EQR5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lime1Q9EQR5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lime1Q9EQR5 Gm9870-201ENSMUST00000063874 645 ntBASIC17.27■□□□□ 0.36
Lime1Q9EQR5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lime1Q9EQR5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lime1Q9EQR5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Lime1Q9EQR5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lime1Q9EQR5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lime1Q9EQR5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lime1Q9EQR5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lime1Q9EQR5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Lime1Q9EQR5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lime1Q9EQR5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lime1Q9EQR5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lime1Q9EQR5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Lime1Q9EQR5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lime1Q9EQR5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lime1Q9EQR5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lime1Q9EQR5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lime1Q9EQR5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lime1Q9EQR5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lime1Q9EQR5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.23■□□□□ 0.35
Lime1Q9EQR5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lime1Q9EQR5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lime1Q9EQR5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lime1Q9EQR5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 131.6 ms