Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Q9CYI0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Q9CYI0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.93■■□□□ 1.1
Q9CYI0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.93■■□□□ 1.1
Q9CYI0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.93■■□□□ 1.1
Q9CYI0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Q9CYI0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Q9CYI0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Q9CYI0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Q9CYI0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.93■■□□□ 1.1
Q9CYI0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Q9CYI0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Q9CYI0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Q9CYI0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Q9CYI0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Q9CYI0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.92■■□□□ 1.1
Q9CYI0 Smad6-203ENSMUST00000179458 273 ntBASIC21.92■■□□□ 1.1
Q9CYI0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Q9CYI0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Q9CYI0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Q9CYI0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Q9CYI0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.91■■□□□ 1.1
Q9CYI0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Q9CYI0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Q9CYI0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Q9CYI0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Q9CYI0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Q9CYI0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Q9CYI0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Q9CYI0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Q9CYI0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Q9CYI0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Q9CYI0 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.9■■□□□ 1.1
Q9CYI0 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.89■■□□□ 1.1
Q9CYI0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Q9CYI0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.89■■□□□ 1.09
Q9CYI0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.89■■□□□ 1.09
Q9CYI0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.89■■□□□ 1.09
Q9CYI0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Q9CYI0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Q9CYI0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.88■■□□□ 1.09
Q9CYI0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q9CYI0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.88■■□□□ 1.09
Q9CYI0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.88■■□□□ 1.09
Q9CYI0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Q9CYI0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.88■■□□□ 1.09
Q9CYI0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.88■■□□□ 1.09
Q9CYI0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Q9CYI0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Q9CYI0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9CYI0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9CYI0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
Q9CYI0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Q9CYI0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Q9CYI0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.87■■□□□ 1.09
Q9CYI0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.87■■□□□ 1.09
Q9CYI0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9CYI0 Gm10493-201ENSMUST00000097270 612 ntBASIC21.87■■□□□ 1.09
Q9CYI0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9CYI0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9CYI0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9CYI0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Q9CYI0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q9CYI0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Q9CYI0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Q9CYI0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
Q9CYI0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Q9CYI0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q9CYI0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q9CYI0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q9CYI0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q9CYI0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Q9CYI0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Q9CYI0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.85■■□□□ 1.09
Q9CYI0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Q9CYI0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Q9CYI0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Q9CYI0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Q9CYI0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Q9CYI0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
Q9CYI0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Q9CYI0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q9CYI0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.84■■□□□ 1.09
Q9CYI0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q9CYI0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q9CYI0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.84■■□□□ 1.09
Q9CYI0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q9CYI0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Q9CYI0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q9CYI0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q9CYI0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Q9CYI0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Q9CYI0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Q9CYI0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Q9CYI0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Q9CYI0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Q9CYI0 Gm40848-201ENSMUST00000221998 324 ntBASIC21.83■■□□□ 1.09
Q9CYI0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Q9CYI0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Q9CYI0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms