Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Rnf111Q99ML9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf111Q99ML9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.19■□□□□ 0.66
Rnf111Q99ML9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf111Q99ML9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf111Q99ML9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf111Q99ML9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf111Q99ML9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf111Q99ML9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rnf111Q99ML9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.16■□□□□ 0.66
Rnf111Q99ML9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf111Q99ML9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf111Q99ML9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf111Q99ML9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf111Q99ML9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf111Q99ML9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf111Q99ML9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf111Q99ML9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rnf111Q99ML9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
Rnf111Q99ML9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf111Q99ML9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf111Q99ML9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.14■□□□□ 0.65
Rnf111Q99ML9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf111Q99ML9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rnf111Q99ML9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rnf111Q99ML9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rnf111Q99ML9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Golph3-205ENSMUST00000228671 2842 ntBASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf111Q99ML9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf111Q99ML9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms