Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Alms1Q8K4E0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alms1Q8K4E0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.53■□□□□ 0.72
Alms1Q8K4E0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alms1Q8K4E0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Alms1Q8K4E0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.52■□□□□ 0.72
Alms1Q8K4E0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alms1Q8K4E0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Alms1Q8K4E0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alms1Q8K4E0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alms1Q8K4E0 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.52■□□□□ 0.72
Alms1Q8K4E0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Alms1Q8K4E0 Gm10653-202ENSMUST00000139570 835 ntBASIC19.52■□□□□ 0.72
Alms1Q8K4E0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.52■□□□□ 0.72
Alms1Q8K4E0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alms1Q8K4E0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alms1Q8K4E0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Alms1Q8K4E0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Alms1Q8K4E0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Alms1Q8K4E0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Alms1Q8K4E0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Alms1Q8K4E0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Alms1Q8K4E0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.51■□□□□ 0.71
Alms1Q8K4E0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alms1Q8K4E0 Gm42778-201ENSMUST00000199644 553 ntBASIC19.51■□□□□ 0.71
Alms1Q8K4E0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alms1Q8K4E0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alms1Q8K4E0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.51■□□□□ 0.71
Alms1Q8K4E0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Alms1Q8K4E0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Gm13148-201ENSMUST00000118892 745 ntBASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Alms1Q8K4E0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Alms1Q8K4E0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Alms1Q8K4E0 Gm12527-201ENSMUST00000117967 564 ntBASIC19.49■□□□□ 0.71
Alms1Q8K4E0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.49■□□□□ 0.71
Alms1Q8K4E0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.49■□□□□ 0.71
Alms1Q8K4E0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Alms1Q8K4E0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Alms1Q8K4E0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Alms1Q8K4E0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Gm22325-201ENSMUST00000158904 308 ntBASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.48■□□□□ 0.71
Alms1Q8K4E0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Alms1Q8K4E0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Alms1Q8K4E0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Alms1Q8K4E0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.47■□□□□ 0.71
Alms1Q8K4E0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alms1Q8K4E0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.47■□□□□ 0.71
Alms1Q8K4E0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alms1Q8K4E0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Alms1Q8K4E0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alms1Q8K4E0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alms1Q8K4E0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alms1Q8K4E0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alms1Q8K4E0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alms1Q8K4E0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alms1Q8K4E0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alms1Q8K4E0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.46■□□□□ 0.71
Alms1Q8K4E0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Alms1Q8K4E0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Alms1Q8K4E0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
Alms1Q8K4E0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Alms1Q8K4E0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alms1Q8K4E0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Alms1Q8K4E0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alms1Q8K4E0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alms1Q8K4E0 Mir7071-201ENSMUST00000184847 69 ntBASIC19.45■□□□□ 0.7
Alms1Q8K4E0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Alms1Q8K4E0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.44■□□□□ 0.7
Alms1Q8K4E0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms