Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.3■■□□□ 1
COL27A1Q8IZC6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
COL27A1Q8IZC6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL27A1Q8IZC6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
COL27A1Q8IZC6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.3■■□□□ 1
COL27A1Q8IZC6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL27A1Q8IZC6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL27A1Q8IZC6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.29■■□□□ 1
COL27A1Q8IZC6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.29■■□□□ 1
COL27A1Q8IZC6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL27A1Q8IZC6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.29■■□□□ 1
COL27A1Q8IZC6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.29■■□□□ 1
COL27A1Q8IZC6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL27A1Q8IZC6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.29■■□□□ 1
COL27A1Q8IZC6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
COL27A1Q8IZC6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL27A1Q8IZC6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.28■■□□□ 1
COL27A1Q8IZC6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL27A1Q8IZC6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL27A1Q8IZC6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL27A1Q8IZC6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL27A1Q8IZC6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
COL27A1Q8IZC6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.28■■□□□ 1
COL27A1Q8IZC6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
COL27A1Q8IZC6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.28■■□□□ 1
COL27A1Q8IZC6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL27A1Q8IZC6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
COL27A1Q8IZC6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
COL27A1Q8IZC6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL27A1Q8IZC6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL27A1Q8IZC6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL27A1Q8IZC6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
COL27A1Q8IZC6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL27A1Q8IZC6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.27■■□□□ 1
COL27A1Q8IZC6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
COL27A1Q8IZC6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL27A1Q8IZC6 AC006015.1-201ENST00000429970 570 ntBASIC21.27■■□□□ 1
COL27A1Q8IZC6 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL27A1Q8IZC6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL27A1Q8IZC6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.27■■□□□ 1
COL27A1Q8IZC6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
COL27A1Q8IZC6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 NTF6G-201ENST00000591094 616 ntBASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 AC135731.1-201ENST00000569415 2548 ntBASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 HLA-L-209ENST00000420110 1011 ntBASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL27A1Q8IZC6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL27A1Q8IZC6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.25■□□□□ 0.99
COL27A1Q8IZC6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL27A1Q8IZC6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.25■□□□□ 0.99
COL27A1Q8IZC6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL27A1Q8IZC6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL27A1Q8IZC6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 AC073111.5-205ENST00000641717 521 ntBASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COL27A1Q8IZC6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 AC105233.4-201ENST00000642045 216 ntBASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.23■□□□□ 0.99
COL27A1Q8IZC6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL27A1Q8IZC6 AC138932.3-201ENST00000567634 1902 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms