Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Smc5Q8CG46 Gm5112-201ENSMUST00000204407 2368 ntBASIC24.64■■□□□ 1.53
Smc5Q8CG46 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Smc5Q8CG46 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Smc5Q8CG46 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Smc5Q8CG46 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Smc5Q8CG46 Gm10657-201ENSMUST00000193528 1031 ntBASIC24.63■■□□□ 1.53
Smc5Q8CG46 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Smc5Q8CG46 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Smc5Q8CG46 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Smc5Q8CG46 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Smc5Q8CG46 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Smc5Q8CG46 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Smc5Q8CG46 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Smc5Q8CG46 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Smc5Q8CG46 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Smc5Q8CG46 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Smc5Q8CG46 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
Smc5Q8CG46 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Smc5Q8CG46 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Gm9870-201ENSMUST00000063874 645 ntBASIC24.61■■□□□ 1.53
Smc5Q8CG46 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Smc5Q8CG46 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Smc5Q8CG46 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Smc5Q8CG46 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Smc5Q8CG46 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Smc5Q8CG46 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Smc5Q8CG46 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Smc5Q8CG46 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Smc5Q8CG46 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Smc5Q8CG46 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC24.58■■□□□ 1.53
Smc5Q8CG46 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC24.58■■□□□ 1.53
Smc5Q8CG46 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.58■■□□□ 1.53
Smc5Q8CG46 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.58■■□□□ 1.53
Smc5Q8CG46 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Smc5Q8CG46 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Smc5Q8CG46 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Smc5Q8CG46 Gm20100-201ENSMUST00000209418 2272 ntBASIC24.58■■□□□ 1.52
Smc5Q8CG46 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
Smc5Q8CG46 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.57■■□□□ 1.52
Smc5Q8CG46 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Smc5Q8CG46 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Smc5Q8CG46 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Smc5Q8CG46 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Smc5Q8CG46 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smc5Q8CG46 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC24.56■■□□□ 1.52
Smc5Q8CG46 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smc5Q8CG46 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smc5Q8CG46 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Smc5Q8CG46 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smc5Q8CG46 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Smc5Q8CG46 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Smc5Q8CG46 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Smc5Q8CG46 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Smc5Q8CG46 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Smc5Q8CG46 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Smc5Q8CG46 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
Smc5Q8CG46 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Smc5Q8CG46 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
Smc5Q8CG46 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Smc5Q8CG46 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Smc5Q8CG46 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Smc5Q8CG46 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Smc5Q8CG46 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Smc5Q8CG46 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
Smc5Q8CG46 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.52■■□□□ 1.52
Smc5Q8CG46 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms