Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc46a2Q8CA03 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Slc46a2Q8CA03 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Slc46a2Q8CA03 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.03■□□□□ 0.64
Slc46a2Q8CA03 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.03■□□□□ 0.64
Slc46a2Q8CA03 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc46a2Q8CA03 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc46a2Q8CA03 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Slc46a2Q8CA03 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slc46a2Q8CA03 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc46a2Q8CA03 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Slc46a2Q8CA03 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slc46a2Q8CA03 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc46a2Q8CA03 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc46a2Q8CA03 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc46a2Q8CA03 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc46a2Q8CA03 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc46a2Q8CA03 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Slc46a2Q8CA03 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Slc46a2Q8CA03 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Slc46a2Q8CA03 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Slc46a2Q8CA03 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Slc46a2Q8CA03 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19■□□□□ 0.63
Slc46a2Q8CA03 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Slc46a2Q8CA03 Golph3-205ENSMUST00000228671 2842 ntBASIC19■□□□□ 0.63
Slc46a2Q8CA03 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19■□□□□ 0.63
Slc46a2Q8CA03 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Slc46a2Q8CA03 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19■□□□□ 0.63
Slc46a2Q8CA03 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc46a2Q8CA03 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slc46a2Q8CA03 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc46a2Q8CA03 Gm7143-201ENSMUST00000222811 859 ntBASIC18.99■□□□□ 0.63
Slc46a2Q8CA03 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slc46a2Q8CA03 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc46a2Q8CA03 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc46a2Q8CA03 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc46a2Q8CA03 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Gm10399-202ENSMUST00000202768 748 ntBASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Gm45444-201ENSMUST00000211394 898 ntBASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc46a2Q8CA03 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc46a2Q8CA03 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc46a2Q8CA03 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc46a2Q8CA03 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms