Protein–RNA interactions for Protein: Q8C0J2

Atg16l1, Autophagy-related protein 16-1, mousemouse

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg16l1Q8C0J2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Atg16l1Q8C0J2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Atg16l1Q8C0J2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atg16l1Q8C0J2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg16l1Q8C0J2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg16l1Q8C0J2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atg16l1Q8C0J2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.74■□□□□ 0.75
Atg16l1Q8C0J2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Atg16l1Q8C0J2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg16l1Q8C0J2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg16l1Q8C0J2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Atg16l1Q8C0J2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Atg16l1Q8C0J2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg16l1Q8C0J2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg16l1Q8C0J2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg16l1Q8C0J2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg16l1Q8C0J2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg16l1Q8C0J2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Atg16l1Q8C0J2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg16l1Q8C0J2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atg16l1Q8C0J2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg16l1Q8C0J2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg16l1Q8C0J2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg16l1Q8C0J2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Atg16l1Q8C0J2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Atg16l1Q8C0J2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg16l1Q8C0J2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg16l1Q8C0J2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Atg16l1Q8C0J2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg16l1Q8C0J2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg16l1Q8C0J2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Atg16l1Q8C0J2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atg16l1Q8C0J2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.71■□□□□ 0.75
Atg16l1Q8C0J2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Atg16l1Q8C0J2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atg16l1Q8C0J2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Mir6538-201ENSMUST00000183713 110 ntBASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Atg16l1Q8C0J2 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.68■□□□□ 0.74
Atg16l1Q8C0J2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg16l1Q8C0J2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Atg16l1Q8C0J2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg16l1Q8C0J2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.68■□□□□ 0.74
Atg16l1Q8C0J2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atg16l1Q8C0J2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atg16l1Q8C0J2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg16l1Q8C0J2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg16l1Q8C0J2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atg16l1Q8C0J2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atg16l1Q8C0J2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg16l1Q8C0J2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atg16l1Q8C0J2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Atg16l1Q8C0J2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Atg16l1Q8C0J2 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.66■□□□□ 0.74
Atg16l1Q8C0J2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Atg16l1Q8C0J2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atg16l1Q8C0J2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Atg16l1Q8C0J2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms