Protein–RNA interactions for Protein: Q8BP97

Rhbdd3, Rhomboid domain-containing protein 3, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdd3Q8BP97 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rhbdd3Q8BP97 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rhbdd3Q8BP97 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rhbdd3Q8BP97 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rhbdd3Q8BP97 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rhbdd3Q8BP97 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rhbdd3Q8BP97 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rhbdd3Q8BP97 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rhbdd3Q8BP97 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rhbdd3Q8BP97 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.12■□□□□ 0.49
Rhbdd3Q8BP97 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rhbdd3Q8BP97 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rhbdd3Q8BP97 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rhbdd3Q8BP97 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rhbdd3Q8BP97 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rhbdd3Q8BP97 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rhbdd3Q8BP97 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rhbdd3Q8BP97 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rhbdd3Q8BP97 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rhbdd3Q8BP97 Gm15546-201ENSMUST00000122095 826 ntBASIC18.11■□□□□ 0.49
Rhbdd3Q8BP97 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Rhbdd3Q8BP97 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.11■□□□□ 0.49
Rhbdd3Q8BP97 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rhbdd3Q8BP97 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rhbdd3Q8BP97 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rhbdd3Q8BP97 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rhbdd3Q8BP97 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rhbdd3Q8BP97 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rhbdd3Q8BP97 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rhbdd3Q8BP97 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rhbdd3Q8BP97 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rhbdd3Q8BP97 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rhbdd3Q8BP97 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rhbdd3Q8BP97 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rhbdd3Q8BP97 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.08■□□□□ 0.49
Rhbdd3Q8BP97 Etf1-202ENSMUST00000180351 108 ntBASIC18.08■□□□□ 0.48
Rhbdd3Q8BP97 Gm7417-201ENSMUST00000192950 473 ntBASIC18.08■□□□□ 0.48
Rhbdd3Q8BP97 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rhbdd3Q8BP97 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rhbdd3Q8BP97 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rhbdd3Q8BP97 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.08■□□□□ 0.48
Rhbdd3Q8BP97 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rhbdd3Q8BP97 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rhbdd3Q8BP97 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhbdd3Q8BP97 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Rhbdd3Q8BP97 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rhbdd3Q8BP97 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rhbdd3Q8BP97 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rhbdd3Q8BP97 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rhbdd3Q8BP97 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.06■□□□□ 0.48
Rhbdd3Q8BP97 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms