Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.21■□□□□ 0.51
Cnih3Q6ZWS4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnih3Q6ZWS4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnih3Q6ZWS4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cnih3Q6ZWS4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnih3Q6ZWS4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.21■□□□□ 0.51
Cnih3Q6ZWS4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnih3Q6ZWS4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnih3Q6ZWS4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnih3Q6ZWS4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnih3Q6ZWS4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnih3Q6ZWS4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnih3Q6ZWS4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnih3Q6ZWS4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.2■□□□□ 0.5
Cnih3Q6ZWS4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnih3Q6ZWS4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnih3Q6ZWS4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cnih3Q6ZWS4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Gm14523-201ENSMUST00000117260 558 ntBASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cnih3Q6ZWS4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnih3Q6ZWS4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnih3Q6ZWS4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnih3Q6ZWS4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cnih3Q6ZWS4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Cnih3Q6ZWS4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cnih3Q6ZWS4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cnih3Q6ZWS4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Cnih3Q6ZWS4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cnih3Q6ZWS4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnih3Q6ZWS4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnih3Q6ZWS4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnih3Q6ZWS4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cnih3Q6ZWS4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cnih3Q6ZWS4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnih3Q6ZWS4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnih3Q6ZWS4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cnih3Q6ZWS4 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.13■□□□□ 0.49
Cnih3Q6ZWS4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnih3Q6ZWS4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnih3Q6ZWS4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnih3Q6ZWS4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cnih3Q6ZWS4 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cnih3Q6ZWS4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Gm7332-201ENSMUST00000118351 454 ntBASIC18.11■□□□□ 0.49
Cnih3Q6ZWS4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms