Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.65■■□□□ 1.54
Ubr3Q5U430 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC24.65■■□□□ 1.54
Ubr3Q5U430 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.65■■□□□ 1.54
Ubr3Q5U430 Gm20049-201ENSMUST00000219950 730 ntBASIC24.65■■□□□ 1.54
Ubr3Q5U430 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ubr3Q5U430 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
Ubr3Q5U430 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC24.64■■□□□ 1.54
Ubr3Q5U430 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Ubr3Q5U430 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC24.64■■□□□ 1.53
Ubr3Q5U430 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Ubr3Q5U430 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC24.64■■□□□ 1.53
Ubr3Q5U430 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
Ubr3Q5U430 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.63■■□□□ 1.53
Ubr3Q5U430 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ubr3Q5U430 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ubr3Q5U430 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ubr3Q5U430 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ubr3Q5U430 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Ubr3Q5U430 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ubr3Q5U430 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Gm37856-201ENSMUST00000191634 999 ntBASIC24.61■■□□□ 1.53
Ubr3Q5U430 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ubr3Q5U430 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Ubr3Q5U430 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ubr3Q5U430 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ubr3Q5U430 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC24.59■■□□□ 1.53
Ubr3Q5U430 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ubr3Q5U430 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ubr3Q5U430 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ubr3Q5U430 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ubr3Q5U430 Gm38205-201ENSMUST00000192243 258 ntBASIC24.58■■□□□ 1.53
Ubr3Q5U430 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.58■■□□□ 1.53
Ubr3Q5U430 Gm6420-201ENSMUST00000193885 723 ntBASIC24.58■■□□□ 1.53
Ubr3Q5U430 AC135637.1-201ENSMUST00000227750 365 ntBASIC24.58■■□□□ 1.53
Ubr3Q5U430 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ubr3Q5U430 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ubr3Q5U430 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Ubr3Q5U430 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Ubr3Q5U430 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC24.58■■□□□ 1.53
Ubr3Q5U430 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Ubr3Q5U430 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ubr3Q5U430 Gm10655-201ENSMUST00000098658 1397 ntBASIC24.58■■□□□ 1.53
Ubr3Q5U430 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ubr3Q5U430 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC24.58■■□□□ 1.52
Ubr3Q5U430 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ubr3Q5U430 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Ubr3Q5U430 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ubr3Q5U430 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC24.57■■□□□ 1.52
Ubr3Q5U430 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ubr3Q5U430 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ubr3Q5U430 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Ubr3Q5U430 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ubr3Q5U430 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ubr3Q5U430 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ubr3Q5U430 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
Ubr3Q5U430 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ubr3Q5U430 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ubr3Q5U430 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ubr3Q5U430 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr3Q5U430 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr3Q5U430 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr3Q5U430 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr3Q5U430 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr3Q5U430 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr3Q5U430 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr3Q5U430 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ubr3Q5U430 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr3Q5U430 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr3Q5U430 Gm6365-201ENSMUST00000054711 744 ntBASIC24.53■■□□□ 1.52
Ubr3Q5U430 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr3Q5U430 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr3Q5U430 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr3Q5U430 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ubr3Q5U430 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr3Q5U430 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr3Q5U430 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr3Q5U430 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.52■■□□□ 1.52
Ubr3Q5U430 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
Ubr3Q5U430 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr3Q5U430 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.52■■□□□ 1.52
Ubr3Q5U430 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ubr3Q5U430 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms