Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-2Q5R1I3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav7-2Q5R1I3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav7-2Q5R1I3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-2Q5R1I3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav7-2Q5R1I3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav7-2Q5R1I3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-2Q5R1I3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-2Q5R1I3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-2Q5R1I3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-2Q5R1I3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-2Q5R1I3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-2Q5R1I3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-2Q5R1I3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-2Q5R1I3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-2Q5R1I3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-2Q5R1I3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Gm14117-201ENSMUST00000122417 843 ntBASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-2Q5R1I3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Gm22238-201ENSMUST00000175222 88 ntBASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Gm9870-201ENSMUST00000063874 645 ntBASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-2Q5R1I3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav7-2Q5R1I3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav7-2Q5R1I3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
Trav7-2Q5R1I3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav7-2Q5R1I3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-2Q5R1I3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-2Q5R1I3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-2Q5R1I3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav7-2Q5R1I3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav7-2Q5R1I3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms