Protein–RNA interactions for Protein: P97489

Gata5, Transcription factor GATA-5, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gata5P97489 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gata5P97489 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gata5P97489 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gata5P97489 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gata5P97489 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gata5P97489 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gata5P97489 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gata5P97489 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gata5P97489 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gata5P97489 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gata5P97489 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gata5P97489 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gata5P97489 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gata5P97489 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Gata5P97489 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Gata5P97489 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gata5P97489 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.45■□□□□ 0.7
Gata5P97489 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gata5P97489 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gata5P97489 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Gata5P97489 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.44■□□□□ 0.7
Gata5P97489 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gata5P97489 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gata5P97489 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gata5P97489 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gata5P97489 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gata5P97489 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.42■□□□□ 0.7
Gata5P97489 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.42■□□□□ 0.7
Gata5P97489 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.42■□□□□ 0.7
Gata5P97489 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gata5P97489 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.41■□□□□ 0.7
Gata5P97489 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gata5P97489 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gata5P97489 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gata5P97489 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gata5P97489 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gata5P97489 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gata5P97489 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gata5P97489 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.4■□□□□ 0.7
Gata5P97489 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gata5P97489 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Gata5P97489 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gata5P97489 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gata5P97489 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gata5P97489 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gata5P97489 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Gata5P97489 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.39■□□□□ 0.7
Gata5P97489 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gata5P97489 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gata5P97489 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Gata5P97489 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gata5P97489 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gata5P97489 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gata5P97489 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gata5P97489 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gata5P97489 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gata5P97489 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.38■□□□□ 0.69
Gata5P97489 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms