Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcdP82347 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcdP82347 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SgcdP82347 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcdP82347 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SgcdP82347 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SgcdP82347 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcdP82347 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcdP82347 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcdP82347 Gm10232-201ENSMUST00000089221 720 ntBASIC18.22■□□□□ 0.51
SgcdP82347 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcdP82347 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcdP82347 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SgcdP82347 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcdP82347 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SgcdP82347 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SgcdP82347 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SgcdP82347 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcdP82347 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.21■□□□□ 0.51
SgcdP82347 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcdP82347 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcdP82347 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SgcdP82347 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.21■□□□□ 0.51
SgcdP82347 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SgcdP82347 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcdP82347 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcdP82347 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcdP82347 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcdP82347 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SgcdP82347 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SgcdP82347 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.21■□□□□ 0.5
SgcdP82347 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SgcdP82347 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SgcdP82347 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SgcdP82347 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SgcdP82347 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SgcdP82347 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SgcdP82347 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.19■□□□□ 0.5
SgcdP82347 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.19■□□□□ 0.5
SgcdP82347 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SgcdP82347 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.18■□□□□ 0.5
SgcdP82347 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcdP82347 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SgcdP82347 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcdP82347 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.18■□□□□ 0.5
SgcdP82347 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SgcdP82347 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SgcdP82347 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.18■□□□□ 0.5
SgcdP82347 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.18■□□□□ 0.5
SgcdP82347 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcdP82347 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SgcdP82347 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcdP82347 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcdP82347 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SgcdP82347 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SgcdP82347 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SgcdP82347 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SgcdP82347 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SgcdP82347 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SgcdP82347 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SgcdP82347 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
SgcdP82347 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SgcdP82347 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SgcdP82347 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.15■□□□□ 0.5
SgcdP82347 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SgcdP82347 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.15■□□□□ 0.5
SgcdP82347 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SgcdP82347 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SgcdP82347 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms