Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox18P43680 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox18P43680 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox18P43680 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.03■□□□□ 0.64
Sox18P43680 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox18P43680 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox18P43680 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox18P43680 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox18P43680 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.03■□□□□ 0.64
Sox18P43680 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Sox18P43680 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox18P43680 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Sox18P43680 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox18P43680 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox18P43680 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox18P43680 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Sox18P43680 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.02■□□□□ 0.64
Sox18P43680 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox18P43680 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sox18P43680 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.02■□□□□ 0.64
Sox18P43680 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sox18P43680 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.02■□□□□ 0.63
Sox18P43680 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox18P43680 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.01■□□□□ 0.63
Sox18P43680 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Sox18P43680 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.01■□□□□ 0.63
Sox18P43680 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox18P43680 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox18P43680 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Sox18P43680 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Sox18P43680 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox18P43680 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19■□□□□ 0.63
Sox18P43680 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox18P43680 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox18P43680 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox18P43680 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox18P43680 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox18P43680 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19■□□□□ 0.63
Sox18P43680 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox18P43680 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox18P43680 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox18P43680 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox18P43680 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox18P43680 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox18P43680 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.99■□□□□ 0.63
Sox18P43680 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sox18P43680 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.99■□□□□ 0.63
Sox18P43680 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Sox18P43680 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox18P43680 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.99■□□□□ 0.63
Sox18P43680 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.98■□□□□ 0.63
Sox18P43680 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Sox18P43680 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sox18P43680 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.98■□□□□ 0.63
Sox18P43680 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sox18P43680 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sox18P43680 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Sox18P43680 Gm13168-201ENSMUST00000121771 632 ntBASIC18.97■□□□□ 0.63
Sox18P43680 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.97■□□□□ 0.63
Sox18P43680 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Sox18P43680 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sox18P43680 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sox18P43680 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.96■□□□□ 0.63
Sox18P43680 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox18P43680 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.96■□□□□ 0.63
Sox18P43680 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.96■□□□□ 0.63
Sox18P43680 Gm27801-201ENSMUST00000184174 223 ntBASIC18.96■□□□□ 0.63
Sox18P43680 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox18P43680 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Sox18P43680 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox18P43680 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox18P43680 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sox18P43680 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.95■□□□□ 0.62
Sox18P43680 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sox18P43680 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sox18P43680 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox18P43680 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox18P43680 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox18P43680 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms