Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pbx1P41778 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pbx1P41778 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.48■■□□□ 1.03
Pbx1P41778 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.48■■□□□ 1.03
Pbx1P41778 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.48■■□□□ 1.03
Pbx1P41778 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.48■■□□□ 1.03
Pbx1P41778 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.48■■□□□ 1.03
Pbx1P41778 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pbx1P41778 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pbx1P41778 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pbx1P41778 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pbx1P41778 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pbx1P41778 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.47■■□□□ 1.03
Pbx1P41778 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.47■■□□□ 1.03
Pbx1P41778 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pbx1P41778 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pbx1P41778 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pbx1P41778 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pbx1P41778 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pbx1P41778 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pbx1P41778 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pbx1P41778 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pbx1P41778 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pbx1P41778 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pbx1P41778 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pbx1P41778 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.46■■□□□ 1.03
Pbx1P41778 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pbx1P41778 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pbx1P41778 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pbx1P41778 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
Pbx1P41778 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pbx1P41778 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.45■■□□□ 1.02
Pbx1P41778 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pbx1P41778 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pbx1P41778 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pbx1P41778 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pbx1P41778 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pbx1P41778 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pbx1P41778 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pbx1P41778 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Pbx1P41778 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pbx1P41778 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pbx1P41778 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pbx1P41778 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Pbx1P41778 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pbx1P41778 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pbx1P41778 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pbx1P41778 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pbx1P41778 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.43■■□□□ 1.02
Pbx1P41778 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.43■■□□□ 1.02
Pbx1P41778 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pbx1P41778 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Pbx1P41778 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pbx1P41778 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pbx1P41778 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pbx1P41778 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Pbx1P41778 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pbx1P41778 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pbx1P41778 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pbx1P41778 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pbx1P41778 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pbx1P41778 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.41■■□□□ 1.02
Pbx1P41778 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pbx1P41778 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pbx1P41778 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pbx1P41778 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pbx1P41778 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pbx1P41778 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pbx1P41778 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pbx1P41778 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pbx1P41778 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pbx1P41778 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.4■■□□□ 1.02
Pbx1P41778 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pbx1P41778 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pbx1P41778 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pbx1P41778 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Pbx1P41778 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pbx1P41778 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.02
Pbx1P41778 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.39■■□□□ 1.01
Pbx1P41778 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pbx1P41778 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pbx1P41778 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pbx1P41778 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pbx1P41778 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.39■■□□□ 1.01
Pbx1P41778 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pbx1P41778 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.38■■□□□ 1.01
Pbx1P41778 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pbx1P41778 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pbx1P41778 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms