Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 URK1YNR012W 1506 nt5.46□□□□□ -1.54
PUB1P32588 KTR5YNL029C 1569 nt5.46□□□□□ -1.54
PUB1P32588 NOP8YOL144W 1455 nt5.45□□□□□ -1.54
PUB1P32588 KIN28YDL108W 921 nt5.45□□□□□ -1.54
PUB1P32588 MHF2YDL160C-A 243 nt5.45□□□□□ -1.54 RIP-Chip
PUB1P32588 TIM22YDL217C 624 nt5.45□□□□□ -1.54
PUB1P32588 Q0092Q0092 141 nt5.45□□□□□ -1.54
PUB1P32588 SNO3YFL060C 669 nt5.45□□□□□ -1.54
PUB1P32588 COS4YFL062W 1140 nt5.45□□□□□ -1.54 RIP-Chip
PUB1P32588 RPN11YFR004W 921 nt5.45□□□□□ -1.54
PUB1P32588 CUP2YGL166W 678 nt5.45□□□□□ -1.54
PUB1P32588 MRPL3YMR024W 1173 nt5.45□□□□□ -1.54
PUB1P32588 YMR084WYMR084W 789 nt5.45□□□□□ -1.54
PUB1P32588 SNO2YNL334C 669 nt5.45□□□□□ -1.54
PUB1P32588 RRG7YOR305W 729 nt5.45□□□□□ -1.54
PUB1P32588 CAR1YPL111W 1002 nt5.45□□□□□ -1.54
PUB1P32588 NHP6BYBR089C-A 300 nt5.45□□□□□ -1.54 RIP-Chip
PUB1P32588 MTC5YDR128W 3447 nt5.45□□□□□ -1.54
PUB1P32588 YMD8YML038C 1329 nt5.45□□□□□ -1.54 RIP-Chip
PUB1P32588 RRB1YMR131C 1536 nt5.44□□□□□ -1.54
PUB1P32588 ERP3YDL018C 678 nt5.44□□□□□ -1.54 RIP-Chip
PUB1P32588 BUD30YDL151C 582 nt5.44□□□□□ -1.54
PUB1P32588 snR82snR82 268 nt5.44□□□□□ -1.54
PUB1P32588 YDR114CYDR114C 303 nt5.44□□□□□ -1.54
PUB1P32588 COQ4YDR204W 1008 nt5.44□□□□□ -1.54
PUB1P32588 PEX10YDR265W 1014 nt5.44□□□□□ -1.54 RIP-Chip
PUB1P32588 SPT15YER148W 723 nt5.44□□□□□ -1.54
PUB1P32588 tR(ACG)DtR(ACG)D 73 nt5.44□□□□□ -1.54
PUB1P32588 tR(ACG)EtR(ACG)E 73 nt5.44□□□□□ -1.54
PUB1P32588 tR(ACG)KtR(ACG)K 73 nt5.44□□□□□ -1.54
PUB1P32588 tR(ACG)LtR(ACG)L 73 nt5.44□□□□□ -1.54
PUB1P32588 tR(ACG)OtR(ACG)O 73 nt5.44□□□□□ -1.54
PUB1P32588 YJL193WYJL193W 1209 nt5.44□□□□□ -1.54
PUB1P32588 YNK1YKL067W 462 nt5.44□□□□□ -1.54 RIP-Chip
PUB1P32588 YLR374CYLR374C 390 nt5.44□□□□□ -1.54
PUB1P32588 PEX15YOL044W 1152 nt5.44□□□□□ -1.54
PUB1P32588 YPL185WYPL185W 396 nt5.44□□□□□ -1.54
PUB1P32588 EFT2YDR385W 2529 nt5.43□□□□□ -1.54
PUB1P32588 EFT1YOR133W 2529 nt5.43□□□□□ -1.54
PUB1P32588 HAL5YJL165C 2568 nt5.43□□□□□ -1.54
PUB1P32588 YMR027WYMR027W 1413 nt5.43□□□□□ -1.54
PUB1P32588 RVB2YPL235W 1416 nt5.43□□□□□ -1.54
PUB1P32588 AIM7YDR063W 450 nt5.43□□□□□ -1.54 RIP-Chip
PUB1P32588 VPS74YDR372C 1038 nt5.43□□□□□ -1.54
PUB1P32588 YDR381C-AYDR381C-A 345 nt5.43□□□□□ -1.54
PUB1P32588 YEL068CYEL068C 333 nt5.43□□□□□ -1.54
PUB1P32588 PUS6YGR169C 1215 nt5.43□□□□□ -1.54
PUB1P32588 RNR2YJL026W 1200 nt5.43□□□□□ -1.54 RIP-Chip
PUB1P32588 YKL071WYKL071W 771 nt5.43□□□□□ -1.54
PUB1P32588 ENV10YLR065C 546 nt5.43□□□□□ -1.54 RIP-Chip
PUB1P32588 RPS1AYLR441C 768 nt5.43□□□□□ -1.54
PUB1P32588 YNL122CYNL122C 348 nt5.43□□□□□ -1.54
PUB1P32588 IGO1YNL157W 507 nt5.43□□□□□ -1.54 RIP-Chip
PUB1P32588 LEM3YNL323W 1245 nt5.43□□□□□ -1.54 RIP-Chip
PUB1P32588 LEE1YPL054W 906 nt5.43□□□□□ -1.54
PUB1P32588 SAM4YPL273W 978 nt5.43□□□□□ -1.54
PUB1P32588 RPN7YPR108W 1290 nt5.43□□□□□ -1.54
PUB1P32588 PCL8YPL219W 1479 nt5.43□□□□□ -1.54 RIP-Chip
PUB1P32588 YBR284WYBR284W 2394 nt5.43□□□□□ -1.54
PUB1P32588 YDR098C-AYDR098C-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YDR210C-CYDR210C-C 1323 nt5.43□□□□□ -1.54
PUB1P32588 YDR261C-CYDR261C-C 1323 nt5.43□□□□□ -1.54
PUB1P32588 YDR316W-AYDR316W-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YDR365W-AYDR365W-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YER137C-AYER137C-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YER159C-AYER159C-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YGR027W-AYGR027W-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YGR038C-AYGR038C-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YGR161C-CYGR161C-C 1323 nt5.43□□□□□ -1.54
PUB1P32588 YJR026WYJR026W 1323 nt5.43□□□□□ -1.54
PUB1P32588 YJR028WYJR028W 1323 nt5.43□□□□□ -1.54
PUB1P32588 YAR010CYAR010C 1323 nt5.43□□□□□ -1.54
PUB1P32588 YLR157C-AYLR157C-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YLR227W-AYLR227W-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YLR256W-AYLR256W-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YML040WYML040W 1323 nt5.43□□□□□ -1.54
PUB1P32588 YML045W-AYML045W-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YMR051CYMR051C 1323 nt5.43□□□□□ -1.54
PUB1P32588 YNL054W-AYNL054W-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YOL103W-AYOL103W-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YPL257W-AYPL257W-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YPR137C-AYPR137C-A 1323 nt5.43□□□□□ -1.54
PUB1P32588 YPR158C-CYPR158C-C 1323 nt5.43□□□□□ -1.54
PUB1P32588 PRO2YOR323C 1371 nt5.42□□□□□ -1.54
PUB1P32588 CYC8YBR112C 2901 nt5.42□□□□□ -1.54
PUB1P32588 KEX2YNL238W 2445 nt5.42□□□□□ -1.54
PUB1P32588 WBP1YEL002C 1293 nt5.42□□□□□ -1.54
PUB1P32588 YER134CYER134C 537 nt5.42□□□□□ -1.54
PUB1P32588 MPC2YHR162W 390 nt5.42□□□□□ -1.54
PUB1P32588 SFT1YKL006C-A 294 nt5.42□□□□□ -1.54
PUB1P32588 YAR047CYAR047C 321 nt5.42□□□□□ -1.54
PUB1P32588 YMR295CYMR295C 594 nt5.42□□□□□ -1.54 RIP-Chip
PUB1P32588 CBP3YPL215W 1008 nt5.42□□□□□ -1.54
PUB1P32588 RGT2YDL138W 2292 nt5.42□□□□□ -1.54
PUB1P32588 TRM1YDR120C 1713 nt5.42□□□□□ -1.54
PUB1P32588 STL1YDR536W 1710 nt5.42□□□□□ -1.54
PUB1P32588 VPS38YLR360W 1320 nt5.42□□□□□ -1.54
PUB1P32588 AIM17YHL021C 1398 nt5.42□□□□□ -1.54 RIP-Chip
PUB1P32588 RTT106YNL206C 1368 nt5.42□□□□□ -1.54
PUB1P32588 CDC34YDR054C 888 nt5.41□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms