Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.46■□□□□ 0.71
Apoa4P06728 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apoa4P06728 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apoa4P06728 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apoa4P06728 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apoa4P06728 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apoa4P06728 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Apoa4P06728 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Apoa4P06728 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apoa4P06728 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apoa4P06728 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Apoa4P06728 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.45■□□□□ 0.7
Apoa4P06728 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Apoa4P06728 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Apoa4P06728 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Apoa4P06728 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Apoa4P06728 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Apoa4P06728 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Apoa4P06728 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apoa4P06728 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.44■□□□□ 0.7
Apoa4P06728 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apoa4P06728 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apoa4P06728 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Apoa4P06728 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Apoa4P06728 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Apoa4P06728 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apoa4P06728 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apoa4P06728 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apoa4P06728 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apoa4P06728 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.43■□□□□ 0.7
Apoa4P06728 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Apoa4P06728 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Apoa4P06728 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Apoa4P06728 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apoa4P06728 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Apoa4P06728 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.42■□□□□ 0.7
Apoa4P06728 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Apoa4P06728 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Apoa4P06728 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Apoa4P06728 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Apoa4P06728 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apoa4P06728 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Apoa4P06728 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Apoa4P06728 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Apoa4P06728 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Apoa4P06728 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.41■□□□□ 0.7
Apoa4P06728 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Apoa4P06728 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apoa4P06728 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apoa4P06728 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Apoa4P06728 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Apoa4P06728 Etf1-202ENSMUST00000180351 108 ntBASIC19.4■□□□□ 0.7
Apoa4P06728 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.4■□□□□ 0.7
Apoa4P06728 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Apoa4P06728 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Apoa4P06728 Iqck-206ENSMUST00000208658 2891 ntBASIC19.39■□□□□ 0.7
Apoa4P06728 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apoa4P06728 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apoa4P06728 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Apoa4P06728 Mir6236-201ENSMUST00000184437 123 ntBASIC19.39■□□□□ 0.69
Apoa4P06728 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.39■□□□□ 0.69
Apoa4P06728 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apoa4P06728 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Apoa4P06728 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Apoa4P06728 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apoa4P06728 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apoa4P06728 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Apoa4P06728 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Apoa4P06728 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Apoa4P06728 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.38■□□□□ 0.69
Apoa4P06728 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Apoa4P06728 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Apoa4P06728 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Apoa4P06728 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.38■□□□□ 0.69
Apoa4P06728 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Apoa4P06728 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Apoa4P06728 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Apoa4P06728 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Apoa4P06728 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Apoa4P06728 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Apoa4P06728 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Apoa4P06728 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Apoa4P06728 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Apoa4P06728 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Apoa4P06728 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Apoa4P06728 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms