Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04224 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
P04224 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
P04224 Gm11175-201ENSMUST00000116172 543 ntBASIC17.3■□□□□ 0.36
P04224 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.3■□□□□ 0.36
P04224 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
P04224 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.3■□□□□ 0.36
P04224 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
P04224 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.3■□□□□ 0.36
P04224 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04224 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04224 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04224 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04224 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04224 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04224 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.29■□□□□ 0.36
P04224 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.29■□□□□ 0.36
P04224 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
P04224 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04224 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04224 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04224 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04224 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
P04224 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.28■□□□□ 0.36
P04224 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04224 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04224 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
P04224 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04224 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.28■□□□□ 0.36
P04224 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.28■□□□□ 0.36
P04224 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04224 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
P04224 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04224 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.28■□□□□ 0.36
P04224 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04224 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
P04224 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
P04224 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04224 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04224 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04224 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04224 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04224 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04224 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04224 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04224 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.27■□□□□ 0.36
P04224 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.27■□□□□ 0.36
P04224 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.27■□□□□ 0.36
P04224 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04224 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04224 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04224 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04224 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.27■□□□□ 0.35
P04224 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04224 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
P04224 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
P04224 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04224 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.25■□□□□ 0.35
P04224 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
P04224 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
P04224 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.25■□□□□ 0.35
P04224 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04224 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.25■□□□□ 0.35
P04224 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms