Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CLDN1O95832 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN1O95832 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN1O95832 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN1O95832 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN1O95832 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN1O95832 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN1O95832 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN1O95832 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN1O95832 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN1O95832 AC006970.2-201ENST00000450065 779 ntBASIC19.81■□□□□ 0.76
CLDN1O95832 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN1O95832 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN1O95832 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN1O95832 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.81■□□□□ 0.76
CLDN1O95832 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN1O95832 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN1O95832 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN1O95832 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN1O95832 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN1O95832 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.8■□□□□ 0.76
CLDN1O95832 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN1O95832 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN1O95832 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CLDN1O95832 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.8■□□□□ 0.76
CLDN1O95832 CROCCP5-201ENST00000436658 830 ntBASIC19.8■□□□□ 0.76
CLDN1O95832 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN1O95832 CD99P1-205ENST00000527459 561 ntBASIC19.8■□□□□ 0.76
CLDN1O95832 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.8■□□□□ 0.76
CLDN1O95832 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN1O95832 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN1O95832 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN1O95832 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN1O95832 AC093323.1-202ENST00000635031 2045 ntBASIC19.8■□□□□ 0.76
CLDN1O95832 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN1O95832 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN1O95832 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN1O95832 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN1O95832 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN1O95832 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN1O95832 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN1O95832 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLDN1O95832 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN1O95832 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN1O95832 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN1O95832 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CLDN1O95832 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN1O95832 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN1O95832 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN1O95832 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN1O95832 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN1O95832 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLDN1O95832 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN1O95832 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN1O95832 TSPY20P-201ENST00000450910 630 ntBASIC19.78■□□□□ 0.76
CLDN1O95832 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN1O95832 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLDN1O95832 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN1O95832 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN1O95832 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN1O95832 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN1O95832 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN1O95832 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN1O95832 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN1O95832 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN1O95832 AP005435.1-201ENST00000529293 1178 ntBASIC19.77■□□□□ 0.76
CLDN1O95832 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN1O95832 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN1O95832 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN1O95832 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN1O95832 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN1O95832 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN1O95832 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN1O95832 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CLDN1O95832 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN1O95832 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN1O95832 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN1O95832 NCF1B-203ENST00000435988 1254 ntBASIC19.76■□□□□ 0.75
CLDN1O95832 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.76■□□□□ 0.75
CLDN1O95832 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.76■□□□□ 0.75
CLDN1O95832 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CLDN1O95832 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN1O95832 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN1O95832 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN1O95832 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLDN1O95832 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN1O95832 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.75■□□□□ 0.75
CLDN1O95832 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLDN1O95832 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms