Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sh2d1aO88890 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Gm14117-201ENSMUST00000122417 843 ntBASIC13.94□□□□□ -0.18
Sh2d1aO88890 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sh2d1aO88890 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.93□□□□□ -0.18
Sh2d1aO88890 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sh2d1aO88890 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Rps24-207ENSMUST00000224568 714 ntBASIC13.93□□□□□ -0.18
Sh2d1aO88890 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sh2d1aO88890 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sh2d1aO88890 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.92□□□□□ -0.18
Sh2d1aO88890 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Gm9870-201ENSMUST00000063874 645 ntBASIC13.91□□□□□ -0.18
Sh2d1aO88890 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sh2d1aO88890 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh2d1aO88890 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.9□□□□□ -0.18
Sh2d1aO88890 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh2d1aO88890 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh2d1aO88890 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh2d1aO88890 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sh2d1aO88890 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh2d1aO88890 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.9□□□□□ -0.18
Sh2d1aO88890 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh2d1aO88890 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sh2d1aO88890 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC13.9□□□□□ -0.18
Sh2d1aO88890 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sh2d1aO88890 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Sh2d1aO88890 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Sh2d1aO88890 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms