Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn3O35701 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn3O35701 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn3O35701 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.96■□□□□ 0.47
Matn3O35701 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn3O35701 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn3O35701 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn3O35701 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn3O35701 Rarb-207ENSMUST00000225921 2756 ntBASIC17.96■□□□□ 0.46
Matn3O35701 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Matn3O35701 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Matn3O35701 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn3O35701 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Matn3O35701 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Matn3O35701 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Matn3O35701 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.95■□□□□ 0.46
Matn3O35701 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn3O35701 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn3O35701 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn3O35701 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn3O35701 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Matn3O35701 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Matn3O35701 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn3O35701 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn3O35701 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn3O35701 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Matn3O35701 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.94■□□□□ 0.46
Matn3O35701 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Matn3O35701 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn3O35701 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Matn3O35701 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Matn3O35701 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Matn3O35701 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Matn3O35701 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn3O35701 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn3O35701 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Matn3O35701 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Matn3O35701 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Matn3O35701 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Matn3O35701 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.93■□□□□ 0.46
Matn3O35701 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Matn3O35701 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Matn3O35701 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Matn3O35701 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Matn3O35701 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Matn3O35701 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Matn3O35701 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Matn3O35701 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Matn3O35701 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Matn3O35701 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Matn3O35701 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Matn3O35701 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Matn3O35701 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.92■□□□□ 0.46
Matn3O35701 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Matn3O35701 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Matn3O35701 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Matn3O35701 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Matn3O35701 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Matn3O35701 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Matn3O35701 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Matn3O35701 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.91■□□□□ 0.46
Matn3O35701 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Matn3O35701 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Matn3O35701 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Matn3O35701 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Matn3O35701 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Matn3O35701 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Matn3O35701 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Matn3O35701 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Matn3O35701 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.9■□□□□ 0.46
Matn3O35701 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Matn3O35701 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Matn3O35701 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Matn3O35701 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Matn3O35701 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Matn3O35701 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Matn3O35701 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Matn3O35701 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Matn3O35701 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Matn3O35701 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.89■□□□□ 0.45
Matn3O35701 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Matn3O35701 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Matn3O35701 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Matn3O35701 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Matn3O35701 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Matn3O35701 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Matn3O35701 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Matn3O35701 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.88■□□□□ 0.45
Matn3O35701 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.88■□□□□ 0.45
Matn3O35701 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Matn3O35701 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Matn3O35701 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Matn3O35701 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Matn3O35701 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Matn3O35701 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Matn3O35701 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.88■□□□□ 0.45
Matn3O35701 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Matn3O35701 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Matn3O35701 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Matn3O35701 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms