Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Gm14523-201ENSMUST00000117260 558 ntBASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav3n-3A0A0G2JEM0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms